# filelist

dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/genome_aligner/_tmp/moc/release
filetypes: ffffffffffff
filenames:
  moc_BuildSArraySettingsWidget.cpp/moc_GenomeAlignerCMDLineTask.cpp/moc_GenomeAlignerFindTask.cpp/moc_GenomeAlignerIndexTask.cpp/moc_GenomeAlignerIndexWorker.cpp/moc_GenomeAlignerPlugin.cpp/moc_GenomeAlignerSettingsWidget.cpp/moc_GenomeAlignerTask.cpp/moc_GenomeAlignerWorker.cpp/moc_GenomeAlignerWriteTask.cpp/moc_ReadShortReadsSubTask.cpp/moc_WriteAlignedReadsSubTask.cpp


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/corelibs/U2Core/src/gobjects
filetypes: ffffffffffffffffffffffffffffff
filenames:
  AnnotationTableObject.cpp/AnnotationTableObject.h/AssemblyObject.cpp/AssemblyObject.h/BioStruct3DObject.cpp/BioStruct3DObject.h/ChromatogramObject.cpp/ChromatogramObject.h/DNASequenceObject.cpp/DNASequenceObject.h/GObjectRelationRoles.cpp/GObjectRelationRoles.h/GObjectTypes.cpp/GObjectTypes.h/GObjectUtils.cpp/GObjectUtils.h/MsaObject.cpp/MsaObject.h/PFMatrixObject.cpp/PFMatrixObject.h/PWMatrixObject.cpp/PWMatrixObject.h/PhyTreeObject.cpp/PhyTreeObject.h/TextObject.cpp/TextObject.h/UnloadedObject.cpp/UnloadedObject.h/VariantTrackObject.cpp/VariantTrackObject.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/corelibs/U2Test/src
filetypes: fffffffd
filenames:
  GTest.cpp/GTest.h/GTestFrameworkComponents.cpp/GTestFrameworkComponents.h/TestRunnerSettings.h/TestRunnerTask.cpp/TestRunnerTask.h/xmltest


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/annotator/_tmp/moc/release
filetypes: ffffffff
filenames:
  moc_AnnotatorPlugin.cpp/moc_AnnotatorTests.cpp/moc_CollocationWorker.cpp/moc_CollocationsDialogController.cpp/moc_CustomAutoAnnotationDialog.cpp/moc_CustomPatternAnnotationTask.cpp/moc_GeneByGeneReportTask.cpp/moc_GeneByGeneReportWorker.cpp


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/corelibs/U2Algorithm/src/util_msaedit
filetypes: ffffdd
filenames:
  CreateSubalignmentTask.cpp/CreateSubalignmentTask.h/MsaUtilTasks.cpp/MsaUtilTasks.h/color_schemes/highlighting_schemes


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/corelibs/U2View/src/util_smith_waterman
filetypes: fffff
filenames:
  SmithWatermanDialog.cpp/SmithWatermanDialog.h/SmithWatermanDialogImpl.h/SubstMatrixDialog.cpp/SubstMatrixDialog.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/corelibs/U2Algorithm/src/phyltree
filetypes: fffffff
filenames:
  CreatePhyTreeSettings.cpp/CreatePhyTreeSettings.h/PhyTreeGenerator.h/PhyTreeGeneratorRegistry.cpp/PhyTreeGeneratorRegistry.h/PhyTreeGeneratorTask.cpp/PhyTreeGeneratorTask.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/genecut/src/io
filetypes: ffff
filenames:
  GenecutHttpFileAdapter.cpp/GenecutHttpFileAdapter.h/GenecutHttpFileAdapterFactory.cpp/GenecutHttpFileAdapterFactory.h


filenames: MuscleDialogFiller.cpp/MuscleDialogFiller.h
filetypes: ff
dirname:
  /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/GUITestBase/src/runnables/ugene/plugins_3rdparty/umuscle


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/corelibs/U2Lang/src/tasks
filetypes: ffffff
filenames:
  ReadDocumentTaskFactory.cpp/ReadDocumentTaskFactory.h/SchemaEstimationTask.cpp/SchemaEstimationTask.h/WorkflowTasksRegistry.cpp/WorkflowTasksRegistry.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/corelibs/U2Algorithm/src/util_msa_distance
filetypes: ffffffffffff
filenames:
  BuiltInDistanceAlgorithms.cpp/BuiltInDistanceAlgorithms.h/MsaDistanceAlgorithm.cpp/MsaDistanceAlgorithm.h/MsaDistanceAlgorithmHamming.cpp/MsaDistanceAlgorithmHamming.h/MsaDistanceAlgorithmHammingRevCompl.cpp/MsaDistanceAlgorithmHammingRevCompl.h/MsaDistanceAlgorithmRegistry.cpp/MsaDistanceAlgorithmRegistry.h/MsaDistanceAlgorithmSimilarity.cpp/MsaDistanceAlgorithmSimilarity.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/workflow_designer/src/library
filenames:
  AminoTranslationWorker.cpp/AminoTranslationWorker.h/AssemblyToSequenceWorker.cpp/AssemblyToSequenceWorker.h/BaseDocWriter.cpp/BaseDocWriter.h/CDSearchWorker.cpp/CDSearchWorker.h/CfgExternalToolModel.cpp/CfgExternalToolModel.h/CmdlineBasedWorkerValidator.cpp/CmdlineBasedWorkerValidator.h/ConvertFilesFormatWorker.cpp/ConvertFilesFormatWorker.h/ConvertSnpeffVariationsToAnnotationsWorker.cpp/ConvertSnpeffVariationsToAnnotationsWorker.h/CoreLib.cpp/CoreLib.h/CustomExternalToolLogParser.h/CustomExternalToolRunTaskHelper.h/DocActors.cpp/DocActors.h/DocWorkers.cpp/DocWorkers.h/ExternalProcessWorker.cpp/ExternalProcessWorker.h/ExtractAssemblyCoverageWorker.cpp/ExtractAssemblyCoverageWorker.h/ExtractConsensusWorker.cpp/ExtractConsensusWorker.h/ExtractMSAConsensusWorker.cpp/ExtractMSAConsensusWorker.h/FASTQWorkersLibrary.cpp/FASTQWorkersLibrary.h/FilterAnnotationsByQualifierWorker.cpp/FilterAnnotationsByQualifierWorker.h/FilterAnnotationsWorker.cpp/FilterAnnotationsWorker.h/FilterBamWorker.cpp/FilterBamWorker.h/FindWorker.cpp/FindWorker.h/GenericReadActor.cpp/GenericReadActor.h/GenericReadWorker.cpp/GenericReadWorker.h/GetFileListWorker.cpp/GetFileListWorker.h/GetReadListWorker.cpp/GetReadListWorker.h/GroupWorker.cpp/GroupWorker.h/ImportAnnotationsWorker.cpp/ImportAnnotationsWorker.h/IncludedProtoFactoryImpl.cpp/IncludedProtoFactoryImpl.h/MSA2SequenceWorker.cpp/MSA2SequenceWorker.h/MarkSequenceWorker.cpp/MarkSequenceWorker.h/MergeBamWorker.cpp/MergeBamWorker.h/MultiplexerWorker.cpp/MultiplexerWorker.h/PassFilterWorker.cpp/PassFilterWorker.h/ReadAnnotationsWorker.cpp/ReadAnnotationsWorker.h/ReadAssemblyWorker.cpp/ReadAssemblyWorker.h/ReadVariationWorker.cpp/ReadVariationWorker.h/RemoteDBFetcherWorker.cpp/RemoteDBFetcherWorker.h/RenameChromosomeInVariationWorker.cpp/RenameChromosomeInVariationWorker.h/ReverseComplementWorker.cpp/ReverseComplementWorker.h/RmdupBamWorker.cpp/RmdupBamWorker.h/SchemaWorker.cpp/SchemaWorker.h/ScriptWorker.cpp/ScriptWorker.h/SequenceQualityTrimWorker.cpp/SequenceQualityTrimWorker.h/SequenceSplitWorker.cpp/SequenceSplitWorker.h/SequencesToMSAWorker.cpp/SequencesToMSAWorker.h/SortBamWorker.cpp/SortBamWorker.h/StatisticWorkers.cpp/StatisticWorkers.h/Text2SequenceWorker.cpp/Text2SequenceWorker.h/WriteAnnotationsWorker.cpp/WriteAnnotationsWorker.h/WriteAssemblyWorkers.cpp/WriteAssemblyWorkers.h/WriteVariationWorker.cpp/WriteVariationWorker.h/create_cmdline_based_worker

filetypes:
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filetypes: ffffffffffffffffffff
dirname:
  /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/GUITestBase/src/runnables/ugene/plugins/workflow_designer

filenames:
  AliasesDialogFiller.cpp/AliasesDialogFiller.h/ConfigurationWizardFiller.cpp/ConfigurationWizardFiller.h/CreateElementWithCommandLineToolFiller.cpp/CreateElementWithCommandLineToolFiller.h/CreateElementWithScriptDialogFiller.cpp/CreateElementWithScriptDialogFiller.h/DashboardsManagerDialogFiller.cpp/DashboardsManagerDialogFiller.h/DatasetNameEditDialogFiller.cpp/DatasetNameEditDialogFiller.h/DefaultWizardFiller.cpp/DefaultWizardFiller.h/StartupDialogFiller.cpp/StartupDialogFiller.h/WizardFiller.cpp/WizardFiller.h/WorkflowMetadialogFiller.cpp/WorkflowMetadialogFiller.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/dna_export/src/dialogs
filetypes: ffff
filenames:
  ExportMca2MsaDialog.cpp/ExportMca2MsaDialog.h/SaveSelectedSequenceFromMSADialogController.cpp/SaveSelectedSequenceFromMSADialogController.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/external_tool_support/src/kalign/pairwise
filetypes: ffff
filenames:
  KalignPairwiseAlignmentGUIExtensionFactory.cpp/KalignPairwiseAlignmentGUIExtensionFactory.h/KalignPairwiseAlignmentTask.cpp/KalignPairwiseAlignmentTask.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins_3rdparty/variants/src
filetypes: ffffff
filenames:
  AssemblySamtoolsMpileup.cpp/AssemblySamtoolsMpileup.h/SamtoolMpileupWorker.cpp/SamtoolMpileupWorker.h/SamtoolsPlugin.cpp/SamtoolsPlugin.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/external_tool_support/src/cufflinks
filetypes: ffffffffffffffffffff
filenames:
  CuffdiffSupportTask.cpp/CuffdiffSupportTask.h/CuffdiffWorker.cpp/CuffdiffWorker.h/CufflinksSettings.cpp/CufflinksSettings.h/CufflinksSupport.cpp/CufflinksSupport.h/CufflinksSupportTask.cpp/CufflinksSupportTask.h/CufflinksWorker.cpp/CufflinksWorker.h/CuffmergeSupportTask.cpp/CuffmergeSupportTask.h/CuffmergeWorker.cpp/CuffmergeWorker.h/GffreadSupportTask.cpp/GffreadSupportTask.h/GffreadWorker.cpp/GffreadWorker.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/external_tool_support/src/bwa
filetypes: ffffffffffd
filenames:
  BwaMemWorker.cpp/BwaMemWorker.h/BwaSettingsWidget.cpp/BwaSettingsWidget.h/BwaSupport.cpp/BwaSupport.h/BwaTask.cpp/BwaTask.h/BwaWorker.cpp/BwaWorker.h/bwa_tests


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/api_tests/src/core/util
filetypes: ffffffffffff
filenames:
  BAMUtilsUnitTests.cpp/BAMUtilsUnitTests.h/DatatypeSerializeUtilsUnitTest.cpp/DatatypeSerializeUtilsUnitTest.h/DynTableTests.cpp/DynTableTests.h/MsaDbiUtilsUnitTests.cpp/MsaDbiUtilsUnitTests.h/MsaImporterExporterUnitTests.cpp/MsaImporterExporterUnitTests.h/MsaUtilsUnitTests.cpp/MsaUtilsUnitTests.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/libs_3rdparty/QSpec/src/primitives
filetypes: ffffffffffffffffffffffffffffffffffffffffffffffffffffd
filenames:
  GTAction.cpp/GTAction.h/GTCheckBox.cpp/GTCheckBox.h/GTComboBox.cpp/GTComboBox.h/GTDoubleSpinBox.cpp/GTDoubleSpinBox.h/GTGroupBox.cpp/GTGroupBox.h/GTLabel.cpp/GTLabel.h/GTLineEdit.cpp/GTLineEdit.h/GTListWidget.cpp/GTListWidget.h/GTMainWindow.cpp/GTMainWindow.h/GTMenu.cpp/GTMenu.h/GTMenuBar.cpp/GTMenuBar.h/GTPlainTextEdit.cpp/GTPlainTextEdit.h/GTRadioButton.cpp/GTRadioButton.h/GTScrollBar.cpp/GTScrollBar.h/GTSlider.cpp/GTSlider.h/GTSpinBox.cpp/GTSpinBox.h/GTSplitter.cpp/GTSplitter.h/GTTabBar.cpp/GTTabBar.h/GTTabWidget.cpp/GTTabWidget.h/GTTableView.cpp/GTTableView.h/GTTextEdit.cpp/GTTextEdit.h/GTToolbar.cpp/GTToolbar.h/GTTreeView.cpp/GTTreeView.h/GTTreeWidget.cpp/GTTreeWidget.h/GTWidget.cpp/GTWidget.h/PopupChooser.cpp/PopupChooser.h/private


filenames: GTTestsProjectRemoteRequest.cpp/GTTestsProjectRemoteRequest.h
filetypes: ff
dirname:
  /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/GUITestBase/src/tests/common_scenarios/project/remote_request


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/biostruct3d_view/src
filetypes: ffffffffffffffffffffffffffffffffffffd
filenames:
  AnaglyphRenderer.cpp/AnaglyphRenderer.h/BallAndStickGLRenderer.cpp/BallAndStickGLRenderer.h/BioStruct3DColorScheme.cpp/BioStruct3DColorScheme.h/BioStruct3DGLImageExportTask.cpp/BioStruct3DGLImageExportTask.h/BioStruct3DGLRender.cpp/BioStruct3DGLRender.h/BioStruct3DGLWidget.cpp/BioStruct3DGLWidget.h/BioStruct3DSplitter.cpp/BioStruct3DSplitter.h/BioStruct3DSubsetEditor.cpp/BioStruct3DSubsetEditor.h/BioStruct3DViewPlugin.cpp/BioStruct3DViewPlugin.h/GLFrameManager.cpp/GLFrameManager.h/GraphicUtils.cpp/GraphicUtils.h/MolecularSurfaceRenderer.cpp/MolecularSurfaceRenderer.h/SelectModelsDialog.cpp/SelectModelsDialog.h/SettingsDialog.cpp/SettingsDialog.h/StructuralAlignmentDialog.cpp/StructuralAlignmentDialog.h/TubeGLRenderer.cpp/TubeGLRenderer.h/VanDerWaalsGLRenderer.cpp/VanDerWaalsGLRenderer.h/WormsGLRenderer.cpp/WormsGLRenderer.h/gl2ps


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/corelibs/U2Algorithm/src/pairwise_alignment
filetypes: ffffff
filenames:
  NWAligner.cpp/NWAligner.h/PairwiseAligner.cpp/PairwiseAligner.h/PairwiseAlignmentTask.cpp/PairwiseAlignmentTask.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/api_tests/src/core/datatype/udr
filetypes: ffff
filenames:
  RawDataUdrSchemaUnitTests.cpp/RawDataUdrSchemaUnitTests.h/UdrSchemaUnitTests.cpp/UdrSchemaUnitTests.h


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/dna_graphpack/_tmp/moc/release
filetypes: fffffff
filenames:
  moc_BaseContentGraph.cpp/moc_CumulativeSkew.cpp/moc_DNAGraphPackPlugin.cpp/moc_DeviationGraph.cpp/moc_EntropyAlgorithm.cpp/moc_GCFramePlot.cpp/moc_KarlinSignatureDifferenceGraph.cpp


dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/external_tool_support/_tmp/moc/release
filenames:
  moc_AlignMsaAction.cpp/moc_AlignToReferenceBlastDialog.cpp/moc_AlignToReferenceBlastWorker.cpp/moc_AvgQualStep.cpp/moc_BaseShortReadsAlignerWorker.cpp/moc_BcfToolsSupport.cpp/moc_BedGraphToBigWigTask.cpp/moc_BedGraphToBigWigWorker.cpp/moc_BedToolsWorkersLibrary.cpp/moc_BedtoolsIntersectTask.cpp/moc_BedtoolsSupport.cpp/moc_BigWigSupport.cpp/moc_BlastAlignToReferenceTask.cpp/moc_BlastCommonTask.cpp/moc_BlastDBCmdDialog.cpp/moc_BlastDBCmdTask.cpp/moc_BlastDBSelectorWidgetController.cpp/moc_BlastNTask.cpp/moc_BlastPTask.cpp/moc_BlastRunCommonDialog.cpp/moc_BlastRunDialog.cpp/moc_BlastSupport.cpp/moc_BlastWorker.cpp/moc_BlastXTask.cpp/moc_Bowtie2SettingsWidget.cpp/moc_Bowtie2Support.cpp/moc_Bowtie2Task.cpp/moc_Bowtie2Tests.cpp/moc_Bowtie2Worker.cpp/moc_BowtieSettingsWidget.cpp/moc_BowtieSupport.cpp/moc_BowtieTask.cpp/moc_BowtieWorker.cpp/moc_BwaMemWorker.cpp/moc_BwaSettingsWidget.cpp/moc_BwaSupport.cpp/moc_BwaTask.cpp/moc_BwaWorker.cpp/moc_CAP3Support.cpp/moc_CAP3SupportDialog.cpp/moc_CAP3SupportTask.cpp/moc_CAP3Worker.cpp/moc_ClustalOSupport.cpp/moc_ClustalOSupportRunDialog.cpp/moc_ClustalOSupportTask.cpp/moc_ClustalOWorker.cpp/moc_ClustalWSupport.cpp/moc_ClustalWSupportRunDialog.cpp/moc_ClustalWSupportTask.cpp/moc_ClustalWWorker.cpp/moc_CmdlineParamsParser.cpp/moc_ComposeResultSubtask.cpp/moc_ConvertAlignment2StockholmTask.cpp/moc_CropStep.cpp/moc_CuffdiffSupportTask.cpp/moc_CuffdiffWorker.cpp/moc_CufflinksSupport.cpp/moc_CufflinksSupportTask.cpp/moc_CufflinksWorker.cpp/moc_CuffmergeSupportTask.cpp/moc_CuffmergeWorker.cpp/moc_ETSProjectViewItemsController.cpp/moc_ExportTasks.cpp/moc_ExternalToolManager.cpp/moc_ExternalToolSearchTask.cpp/moc_ExternalToolSupportAction.cpp/moc_ExternalToolSupportL10N.cpp/moc_ExternalToolSupportPlugin.cpp/moc_ExternalToolSupportSettings.cpp/moc_ExternalToolSupportSettingsController.cpp/moc_ExternalToolUtils.cpp/moc_ExternalToolValidateTask.cpp/moc_FastTreeSupport.cpp/moc_FastTreeTask.cpp/moc_FastTreeWidget.cpp/moc_FastqcSupport.cpp/moc_FastqcTask.cpp/moc_FastqcWorker.cpp/moc_GffreadSupportTask.cpp/moc_GffreadWorker.cpp/moc_HeadCropStep.cpp/moc_HmmerBuildDialog.cpp/moc_HmmerBuildFromFileTask.cpp/moc_HmmerBuildFromMsaTask.cpp/moc_HmmerBuildTask.cpp/moc_HmmerBuildTaskTest.cpp/moc_HmmerBuildWorker.cpp/moc_HmmerParseSearchResultsTask.cpp/moc_HmmerSearchDialog.cpp/moc_HmmerSearchTask.cpp/moc_HmmerSearchTaskTest.cpp/moc_HmmerSearchWorker.cpp/moc_HmmerSupport.cpp/moc_IQTreeSupport.cpp/moc_IQTreeTask.cpp/moc_IQTreeWidget.cpp/moc_IlluminaClipStep.cpp/moc_ImportCustomToolsTask.cpp/moc_ImportExternalToolDialog.cpp/moc_JavaSupport.cpp/moc_KalignPairwiseAlignmentGUIExtensionFactory.cpp/moc_KalignSupport.cpp/moc_KalignSupportRunDialog.cpp/moc_KalignSupportTask.cpp/moc_KalignWorker.cpp/moc_Kraken2ClassifyPrompter.cpp/moc_Kraken2ClassifyTask.cpp/moc_Kraken2ClassifyWorker.cpp/moc_Kraken2Support.cpp/moc_LeadingStep.cpp/moc_LengthSettingsWidget.cpp/moc_LineEditHighlighter.cpp/moc_LoadCustomExternalToolsTask.cpp/moc_MAFFTSupport.cpp/moc_MAFFTSupportRunDialog.cpp/moc_MAFFTSupportTask.cpp/moc_MAFFTWorker.cpp/moc_MafftAddToAlignmentTask.cpp/moc_MakeBlastDbAlignerSubtask.cpp/moc_MakeBlastDbDialog.cpp/moc_MakeBlastDbTask.cpp/moc_MaxInfoStep.cpp/moc_MfoldDialog.cpp/moc_MfoldSupport.cpp/moc_MfoldTask.cpp/moc_MfoldTests.cpp/moc_MinLenStep.cpp/moc_MrBayesDialogWidget.cpp/moc_MrBayesSupport.cpp/moc_MrBayesTask.cpp/moc_MrBayesTests.cpp/moc_NoSettingsWidget.cpp/moc_PerlSupport.cpp/moc_PhmmerSearchDialog.cpp/moc_PhmmerSearchTask.cpp/moc_PhmmerSearchTaskTest.cpp/moc_PhyMLDialogWidget.cpp/moc_PhyMLSupport.cpp/moc_PhyMLTask.cpp/moc_PhyMLTests.cpp/moc_PrepareInputFastaFilesTask.cpp/moc_PrepareReferenceSequenceTask.cpp/moc_Python3ModuleCutadaptSupport.cpp/moc_Python3ModuleCutadaptWorker.cpp/moc_Python3Support.cpp/moc_QualitySettingsWidget.cpp/moc_RPSBlastTask.cpp/moc_RegisterCustomToolTask.cpp/moc_RemoveGapsFromSequenceTask.cpp/moc_RunnerTool.cpp/moc_SamToolsExtToolSupport.cpp/moc_SlidingWindowStep.cpp/moc_SnpEffDatabaseDelegate.cpp/moc_SnpEffDatabaseListModel.cpp/moc_SnpEffDatabaseListTask.cpp/moc_SnpEffSupport.cpp/moc_SnpEffTask.cpp/moc_SnpEffWorker.cpp/moc_SpadesDelegate.cpp/moc_SpadesSettingsWidget.cpp/moc_SpadesSupport.cpp/moc_SpadesTask.cpp/moc_SpadesTaskTest.cpp/moc_SpadesWorker.cpp/moc_SpideySupport.cpp/moc_SpideySupportTask.cpp/moc_StringTieSupport.cpp/moc_StringTieTask.cpp/moc_StringTieWorker.cpp/moc_StringtieGeneAbundanceReportPrompter.cpp/moc_StringtieGeneAbundanceReportTask.cpp/moc_StringtieGeneAbundanceReportWorker.cpp/moc_TBlastNTask.cpp/moc_TBlastXTask.cpp/moc_TabixSupport.cpp/moc_TabixSupportTask.cpp/moc_ToPhred33Step.cpp/moc_ToPhred64Step.cpp/moc_TopHatSupport.cpp/moc_TopHatSupportTask.cpp/moc_TopHatWorker.cpp/moc_TrailingStep.cpp/moc_TrimmomaticDelegate.cpp/moc_TrimmomaticStep.cpp/moc_TrimmomaticSupport.cpp/moc_TrimmomaticTask.cpp/moc_TrimmomaticWorker.cpp/moc_VcfConsensusSupport.cpp/moc_VcfConsensusSupportTask.cpp/moc_VcfConsensusWorker.cpp/moc_VcfutilsSupport.cpp/moc_bowtieTests.cpp/moc_bwaTests.cpp

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dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/external_tool_support/src
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filenames:
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dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/dna_export/_tmp/moc/release
filetypes: ffffffffffffffffffffffffffffff
filenames:
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filenames: GTTestsMSAEditorOverview.cpp/GTTestsMSAEditorOverview.h
filetypes: ff
dirname:
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dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/corelibs/U2Lang/_tmp/moc/release
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filenames:
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dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/corelibs/U2View/src
filetypes: ffffffdddddddddddd
filenames:
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filenames: GTTestsBookmarks.cpp/GTTestsBookmarks.h
filetypes: ff
dirname:
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dirname: /usr/src/debug/ugene-52.1-2.fc41.aarch64/src/plugins/GUITestBase/src/tests/crazy_user
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filenames:
  GTAbstractGUIAction.cpp/GTAbstractGUIAction.h/GTRandomGUIActionFactory.cpp/GTRandomGUIActionFactory.h/GUICrazyUserTest.cpp/GUICrazyUserTest.h


filenames: GTTestsFastTree.cpp/GTTestsFastTree.h
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filetypes:
[cell repeats an earlier one in this file: 116 characters]


dirname: /usr/src/debug/vdr-extrecmenung-2.0.14-1.fc41.aarch64
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dirname: /usr/src/debug/vdr-skinelchihd-1.2.9-1.fc41.aarch64/symbols
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filetypes:
[cell repeats an earlier one in this file: 141 characters]


dirname: /usr/src/debug/vdr-skinelchihd-1.2.9-1.fc41.aarch64
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dirname: /usr/src/debug/vdr-tvscraper-1.2.14-1.fc41.aarch64
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[cell repeats an earlier one in this file: 133 characters]


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  ERIs.h/GaussianQuadratureBase.h/ImaginaryAxisIntegration.h/IncrementalFockBuilder.h/IndexParser.h/activedensitymatrix.h/adiis.h/adiis_costfunction.h/amplitude_integration.h/anderson_mixing.h/aobasis.h/aomatrix.h/aopotential.h/aoshell.h/aotransform.h/atom.h/atomcontainer.h/basisset.h/bfgs_trm.h/bse.h/bse_operator.h/bse_population.h/bsecoupling.h/bseoperator_btda.h/calculatorfactory.h/chargecarrier.h/checkpoint.h/checkpoint_utils.h/checkpointreader.h/checkpointtable.h/checkpointwriter.h/classicalsegment.h/convergenceacc.h/couplingbase.h/cubefile_writer.h/davidsonsolver.h/density_integration.h/dftcoupling.h/dftengine.h/diis.h/dipoledipoleinteraction.h/ecpaobasis.h/ecpbasisset.h/eeinteractor.h/eigen.h/energy_terms.h/erdiabatization.h/esp2multipole.h/espfit.h/fcddiabatization.h/filterfactory.h/gaussianwriter.h/glink.h/gmhdiabatization.h/gnode.h/grid.h/grid_containers.h/gridbox.h/gw.h/gwbse.h/gwbseengine.h/gyration.h/hist.h/huffmantree.h/job.h/jobcalculator.h/jobcalculatorfactory.h/jobtopology.h/kmccalculator.h/logger.h/matrixfreeoperator.h/md2qmengine.h/mmregion.h/molden.h/nbo.h/newton_rapson.h/openmp_cuda.h/optimiser_costfunction.h/orbitals.h/orbreorder.h/parallelxjobcalc.h/pmlocalization.h/polarregion.h/polarsite.h/populationanalysis.h/ppm.h/progressobserver.h/qmatom.h/qmcalculator.h/qmfragment.h/qmmolecule.h/qmnblist.h/qmpackage.h/qmpackagefactory.h/qmpair.h/qmregion.h/qmstate.h/qmthread.h/qmtool.h/quadrature_factory.h/radial_euler_maclaurin_rule.h/rate_engine.h/region.h/regular_grid.h/rpa.h/segid.h/segment.h/segmentmapper.h/sigma_base.h/sigmafactory.h/sphere_lebedev_rule.h/stateapplication.h/statefilter_base.h/statesaver.h/statetracker.h/staticregion.h/staticsite.h/symmetric_matrix.h/threecenter.h/toolfactory.h/topology.h/transition_densities.h/trustregion.h/vc2index.h/version.h/vxc_functionals.h/vxc_grid.h/vxc_potential.h/xtpapplication.h

filetypes:
[cell repeats an earlier one in this file: 129 characters]


dirname: /usr/src/debug/votca-2024.2-2.fc41.aarch64/xtp/src/libxtp/factories
filetypes: fffffff
filenames:
  calculatorfactory.cc/filterfactory.cc/jobcalculatorfactory.cc/qmpackagefactory.cc/quadrature_factory.cc/sigmafactory.cc/toolfactory.cc


dirname: /usr/src/debug/votca-2024.2-2.fc41.aarch64/xtp/src/libxtp/calculators
filetypes: fffffffffffffff
filenames:
  eanalyze.cc/eanalyze.h/einternal.cc/einternal.h/ianalyze.cc/ianalyze.h/kmclifetime.cc/kmclifetime.h/kmcmultiple.cc/kmcmultiple.h/mapchecker.h/neighborlist.cc/neighborlist.h/vaverage.cc/vaverage.h


